Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_0003J7_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000130921-ENSG00000111328	CGP	9606	12:123232916-123272334
Gene	Transcript	Position	Biotype
ENSG00000051825 (MPHOSPH9) M-phase phosphoprotein 9	ENST00000302373 (MPHOSPH9-005)	123156636-123221847	nonsense_mediated_decay
	ENST00000369865 (MPHOSPH9-022)	123230037-123233101	retained_intron
	ENST00000535049 (MPHOSPH9-017)	123221843-123233126	nonsense_mediated_decay
	ENST00000536198 (MPHOSPH9-010)	123161268-123163400	retained_intron
	ENST00000537854 (MPHOSPH9-018)	123218458-123233170	protein_coding
	ENST00000538169 (MPHOSPH9-019)	123221808-123233136	processed_transcript
	ENST00000538250 (MPHOSPH9-023)	123162773-123165462	retained_intron
	ENST00000539024 (MPHOSPH9-003)	123159694-123218478	nonsense_mediated_decay
	ENST00000539336 (MPHOSPH9-014)	123202885-123223127	protein_coding
	ENST00000539639 (MPHOSPH9-020)	123221665-123233238	processed_transcript
	ENST00000541076 (MPHOSPH9-025)	123154215-123230446	protein_coding
	ENST00000541437 (MPHOSPH9-015)	123221693-123233107	protein_coding
	ENST00000541603 (MPHOSPH9-008)	123152324-123163961	protein_coding
	ENST00000541823 (MPHOSPH9-009)	123166361-123179980	retained_intron
	ENST00000544217 (MPHOSPH9-012)	123152320-123155816	processed_transcript
	ENST00000545406 (MPHOSPH9-021)	123227468-123244014	protein_coding
	ENST00000545556 (MPHOSPH9-006)	123156636-123233111	nonsense_mediated_decay
	ENST00000545974 (MPHOSPH9-011)	123156399-123163026	retained_intron
	ENST00000563178 (MPHOSPH9-024)	123240529-123243952	processed_transcript
	ENST00000606320 (MPHOSPH9-030)	123154215-123233123	protein_coding
	ENST00000606321 (MPHOSPH9-028)	123163769-123176716	protein_coding
	ENST00000606326 (MPHOSPH9-026)	123194509-123202838	nonsense_mediated_decay
	ENST00000606704 (MPHOSPH9-029)	123156774-123163036	nonsense_mediated_decay
	ENST00000607619 (MPHOSPH9-027)	123163084-123165606	retained_intron
ENSG00000111328 (CDK2AP1) cyclin-dependent kinase 2 associated protein 1	ENST00000261692 (CDK2AP1-001)	123260981-123272140	protein_coding
	ENST00000535796 (CDK2AP1-006)	123265193-123268284	protein_coding
	ENST00000535979 (CDK2AP1-002)	123261003-123271141	protein_coding
	ENST00000538446 (CDK2AP1-003)	123261003-123269239	protein_coding
	ENST00000542174 (CDK2AP1-005)	123261012-123268077	protein_coding
	ENST00000544658 (CDK2AP1-004)	123261276-123272334	protein_coding
	ENST00000618072 (CDK2AP1-201)	123260971-123268254	protein_coding
ENSG00000130921 (C12orf65) chromosome 12 open reading frame 65	ENST00000253233 (C12orf65-001)	123232916-123257959	protein_coding
	ENST00000366329 (C12orf65-201)	123233481-123257959	protein_coding
	ENST00000425637 (C12orf65-002)	123233437-123256962	retained_intron
	ENST00000429587 (C12orf65-007)	123253390-123257571	protein_coding
	ENST00000536130 (C12orf65-005)	123233458-123253783	protein_coding
	ENST00000538888 (C12orf65-008)	123233437-123256891	retained_intron
	ENST00000543139 (C12orf65-003)	123248278-123256945	protein_coding
	ENST00000546132 (C12orf65-006)	123233462-123253964	protein_coding
ENSG00000269980 (RP11-282O18.7)	ENST00000602352 (RP11-282O18.7-001)	123262060-123262402	antisense

CIL_0003J7_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000047635-ENSMUSG00000029394	CGP	10090	5:124328089-124354671
Gene	Transcript	Position	Biotype
ENSMUSG00000029394 (Cdk2ap1) CDK2 (cyclin-dependent kinase 2)-associated protein 1	ENSMUST00000031341 (Cdk2ap1-001)	124345417-124354671	protein_coding
	ENSMUST00000111472 (Cdk2ap1-002)	124345763-124352233	protein_coding
	ENSMUST00000111473 (Cdk2ap1-004)	124345744-124350254	protein_coding
	ENSMUST00000111474 (Cdk2ap1-003)	124345605-124351654	protein_coding
ENSMUSG00000047635 (2810006K23Rik) RIKEN cDNA 2810006K23 gene	ENSMUST00000077376 (2810006K23Rik-001)	124328098-124341844	protein_coding
	ENSMUST00000111477 (2810006K23Rik-002)	124328089-124340122	protein_coding

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000051825

ENST00000302373

N/A

0.916±0.00

1.544±0.17

1.104±0.00

1.186±0.21

0.810±0.00

N/A

2.082±0.00

N/A

2.710±0.46

0.966±0.45

5.756±2.66

N/A

N/A

N/A

N/A

N/A

N/A

5.692±0.00

N/A

N/A

N/A

N/A

N/A

2.236±0.00

N/A

0.426±0.00

N/A

1.364±0.00

N/A

0.722±0.00

N/A

0.384±0.04

N/A

N/A

N/A

N/A

N/A

N/A

N/A

0.870±0.00

N/A

1.094±0.00

N/A

ENST00000545974

N/A

ENST00000563178

N/A

ENST00000606320

0.447±0.00

1.388±0.00

N/A

0.876±0.34

0.607±0.04

0.937±0.00

0.679±0.05

0.581±0.06

0.645±0.11

0.654±0.00

0.578±0.00

1.622±0.61

0.772±0.00

2.607±1.12

ENST00000606321

N/A

ENST00000606326

N/A

7.195±0.00

N/A

ENST00000606704

N/A

ENST00000607619

N/A

ENSG00000111328

ENST00000261692

25.214±0.00

27.366±0.00

5.235±0.00

23.782±6.98

20.911±8.33

16.198±13.18

12.517±9.75

21.072±0.00

7.241±3.53

14.763±11.27

5.230±0.33

30.244±21.88

13.492±6.14

24.981±9.86

ENST00000535796

N/A

ENST00000535979

11.538±0.00

24.909±0.00

N/A

26.748±0.00

14.822±0.00

17.346±0.00

15.436±0.00

12.405±0.00

13.178±0.00

14.240±0.00

12.516±0.00

15.567±0.00

4.344±0.00

20.468±6.61

ENST00000538446

N/A

3.542±0.00

N/A

ENST00000542174

N/A

ENST00000544658

9.535±0.00

N/A

20.558±0.00

12.579±0.00

9.233±0.00

N/A

22.710±0.00

N/A

74.405±0.00

37.187±0.00

27.639±13.99

ENST00000618072

N/A

22.170±0.00

N/A

6.890±0.00

1.222±0.00

7.836±0.00

10.246±0.00

6.983±0.00

3.897±0.00

15.048±9.62

24.232±4.90

N/A

ENSG00000130921

ENST00000253233

N/A

2.447±1.16

N/A

2.800±0.00

N/A

3.487±0.00

2.273±0.00

N/A

2.337±0.00

9.541±0.00

3.620±0.34

6.646±0.00

ENST00000366329

1.894±0.00

5.428±0.00

N/A

4.241±0.00

2.949±0.00

2.598±0.00

2.704±0.00

4.401±0.00

2.647±0.00

5.790±0.00

N/A

3.933±0.00

1.530±0.00

N/A

ENST00000425637

N/A

ENST00000429587

N/A

1.545±0.00

N/A

3.932±0.00

N/A

ENST00000536130

N/A

ENST00000538888

N/A

ENST00000543139

N/A

3.950±0.00

N/A

1.921±0.32

1.566±0.00

1.163±0.00

2.605±0.00

N/A

1.424±0.00

N/A

4.876±3.31

N/A

ENST00000546132

N/A

ENSG00000269980

ENST00000602352

0.220±0.00

0.387±0.00

N/A

0.057±0.00

N/A

0.055±0.00

N/A

0.852±0.48

N/A

0.566±0.00

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000029394

ENSMUST00000031341

16.717±4.15

13.906±5.49

16.032±3.12

54.078±26.29

13.987±1.74

12.499±1.09

12.344±0.98

9.033±0.90

15.910±14.99

9.352±1.10

24.841±2.03

17.915±3.26

13.171±4.70

3.776±1.28

ENSMUST00000111472

N/A

6.075±0.00

N/A

22.019±9.68

N/A

8.817±2.02

2.035±0.00

ENSMUST00000111473

N/A

5.417±0.00

15.423±0.00

6.648±0.00

N/A

5.861±0.00

N/A

4.601±0.44

N/A

4.382±0.00

N/A

ENSMUST00000111474

N/A

14.630±1.76

N/A

11.536±4.12

5.421±1.52

9.073±0.67

2.827±0.56

2.821±0.73

1.695±0.62

4.931±1.58

N/A

11.415±4.74

N/A

1.797±0.35

ENSMUSG00000047635

ENSMUST00000077376

4.797±0.50

5.065±0.39

3.790±0.08

3.377±0.99

4.083±1.02

2.876±0.48

4.011±0.20

4.499±0.24

3.635±0.45

2.645±0.44

3.377±0.33

5.834±1.09

4.656±1.19

2.260±0.93

ENSMUST00000111477

0.589±0.02

0.618±0.18

0.587±0.00

0.681±0.12

0.556±0.15

0.357±0.13

N/A

0.347±0.00

0.291±0.00

N/A

0.674±0.17

N/A

1.003±0.15

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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