C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017439-ENSDARG00000076292 CGP 7955 23:10503116-10693485
GeneTranscriptPositionBiotype
ENSDARG00000017439 (eif4ba)
eukaryotic translation initiation factor 4Ba 		ENSDART00000046577 (eif4ba-201) 10503116-10555684 protein_coding
ENSDART00000125103 (eif4ba-001) 10503117-10555677 protein_coding
ENSDART00000139100 (eif4ba-002) 10532447-10555233 protein_coding
ENSDART00000144267 (eif4ba-003) 10538004-10554916 protein_coding
ENSDARG00000076292 (tenc1a)
tensin like C1 domain containing phosphatase a 		ENSDART00000112445 (tenc1a-201) 10576456-10692905 protein_coding
ENSDART00000140557 (tenc1a-001) 10576183-10693485 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00033N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000063046-ENSG00000111077 CGP 9606 12:53006158-53064372
GeneTranscriptPositionBiotype
ENSG00000063046 (EIF4B)
eukaryotic translation initiation factor 4B 		ENST00000262056 (EIF4B-001) 53006158-53042209 protein_coding
ENST00000416762 (EIF4B-005) 53006457-53040462 protein_coding
ENST00000420463 (EIF4B-007) 53006456-53040280 protein_coding
ENST00000549077 (EIF4B-010) 53006431-53027856 nonsense_mediated_decay
ENST00000549481 (EIF4B-015) 53006468-53034619 protein_coding
ENST00000549592 (EIF4B-008) 53037726-53040352 retained_intron
ENST00000549645 (EIF4B-017) 53006448-53021835 processed_transcript
ENST00000550025 (EIF4B-011) 53018860-53021916 retained_intron
ENST00000550390 (EIF4B-012) 53006484-53027872 nonsense_mediated_decay
ENST00000550704 (EIF4B-013) 53006459-53037434 nonsense_mediated_decay
ENST00000551002 (EIF4B-014) 53006456-53022607 protein_coding
ENST00000551527 (EIF4B-009) 53006282-53021758 processed_transcript
ENST00000552490 (EIF4B-016) 53006469-53028173 protein_coding
ENST00000553209 (EIF4B-018) 53034646-53037724 retained_intron
ENSG00000167778 (SPRYD3)
SPRY domain containing 3 		ENST00000301463 (SPRYD3-001) 53064316-53079420 protein_coding
ENST00000537540 (SPRYD3-002) 53066602-53079404 nonsense_mediated_decay
ENST00000547257 (SPRYD3-006) 53064951-53066359 nonsense_mediated_decay
ENST00000547837 (SPRYD3-003) 53065661-53079377 protein_coding
ENST00000550252 (SPRYD3-005) 53073160-53075744 retained_intron
ENST00000550564 (SPRYD3-004) 53068291-53079388 retained_intron
ENSG00000257475 (RP11-983P16.2)
 ENST00000435621 (RP11-983P16.2-001) 53012104-53013921 sense_intronic
ENSG00000278108 (MIR6757)
microRNA 6757 		ENST00000612099 (MIR6757-201) 53056944-53057012 miRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00033N_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058655-ENSMUSG00000037003 CGP 10090 15:102073773-102116401
GeneTranscriptPositionBiotype
ENSMUSG00000037003 (Tenc1)
tensin like C1 domain-containing phosphatase 		ENSMUST00000046144 (Tenc1-201) 102102988-102116391 protein_coding
ENSMUST00000169627 (Tenc1-202) 102102988-102116401 protein_coding
ENSMUSG00000058655 (Eif4b)
eukaryotic translation initiation factor 4B 		ENSMUST00000169681 (Eif4b-201) 102073773-102097172 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033N_0001ENSDARG00000017439ENSDART00000046577ENSDART00000125103ENSDART00000139100ENSDART00000144267ENSDARG00000076292ENSDART00000112445ENSDART00000140557CIL_00033N_0002ENSG00000063046ENST00000262056ENST00000416762ENST00000420463ENST00000549077ENST00000549481ENST00000549592ENST00000549645ENST00000550025ENST00000550390ENST00000550704ENST00000551002ENST00000551527ENST00000552490ENST00000553209ENSG00000167778ENST00000301463ENST00000537540ENST00000547257ENST00000547837ENST00000550252ENST00000550564ENSG00000257475ENST00000435621ENSG00000278108ENST00000612099CIL_00033N_0003ENSMUSG00000037003ENSMUST00000046144ENSMUST00000169627ENSMUSG00000058655ENSMUST00000169681
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033N_0001ENSDARG00000017439ENSDART00000046577ENSDART00000125103ENSDART00000139100ENSDARG00000076292ENSDART00000112445ENSDART00000140557CIL_00033N_0002ENSG00000063046ENST00000262056ENST00000416762ENSG00000167778ENST00000301463ENSG00000257475ENST00000435621ENSG00000278108ENST00000612099CIL_00033N_0003ENSMUSG00000037003ENSMUST00000046144ENSMUST00000169627ENSMUSG00000058655ENSMUST00000169681
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017439 ENSDART00000046577 N/A N/A N/A 9.638±0.45 N/A N/A 2.836±1.99 0.991±0.41 N/A N/A 3.574±0.00 N/A N/A N/A
ENSDART00000125103 N/A N/A N/A 7.104±3.91 N/A N/A 5.256±0.00 1.052±0.56 0.572±0.00 N/A N/A N/A N/A N/A
ENSDART00000139100 N/A N/A N/A N/A N/A N/A 1.765±0.40 N/A N/A N/A 2.552±0.00 N/A N/A N/A
ENSDART00000144267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076292 ENSDART00000112445 N/A N/A N/A 1.332±0.00 N/A N/A 5.297±0.00 N/A 0.333±0.00 N/A 2.208±0.00 N/A N/A N/A
ENSDART00000140557 N/A N/A N/A 1.081±0.86 N/A N/A 2.859±0.53 4.759±0.00 0.290±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000063046 ENST00000262056 158.408±0.00 N/A 22.117±0.00 26.503±4.02 39.485±0.96 93.777±56.62 30.524±2.11 38.844±6.30 38.528±30.30 77.094±33.05 70.324±40.53 117.598±83.77 56.851±8.51 45.477±0.00
ENST00000416762 N/A N/A 41.258±0.00 34.137±0.00 56.676±0.00 43.099±0.00 45.213±0.00 62.794±0.00 97.661±0.00 52.620±0.00 30.046±0.00 61.834±23.69 46.162±0.00 37.282±0.00
ENST00000420463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167778 ENST00000301463 N/A N/A N/A 50.426±26.53 N/A N/A N/A 31.815±0.00 12.239±0.00 N/A N/A N/A N/A N/A
ENST00000537540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257475 ENST00000435621 0.514±0.00 0.964±0.00 N/A 1.006±0.28 0.496±0.00 N/A 0.160±0.00 0.455±0.00 0.180±0.08 0.208±0.00 0.064±0.00 0.194±0.16 0.138±0.00 0.645±0.13
ENSG00000278108 ENST00000612099 3.210±0.00 3.978±0.00 N/A N/A 1.168±0.00 N/A 0.572±0.00 N/A 1.691±0.00 1.852±0.00 N/A 182.039±0.00 N/A 0.515±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037003 ENSMUST00000046144 N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A 1.153±0.19 N/A N/A 2.452±0.00 7.957±0.00 0.079±0.00
ENSMUST00000169627 28.373±8.03 16.983±3.29 15.690±4.92 1.445±0.64 20.675±8.05 11.261±2.52 24.114±5.85 19.746±3.55 4.244±2.60 56.247±11.72 8.420±2.91 13.222±3.50 9.192±3.23 1.334±0.04
ENSMUSG00000058655 ENSMUST00000169681 47.888±20.68 30.486±4.14 62.242±6.16 50.706±1.91 32.359±5.92 41.004±2.34 25.551±2.32 55.481±3.16 43.012±15.76 34.440±5.60 58.583±2.59 80.383±29.52 55.309±35.02 24.907±4.17

Loading