C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000111_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198883-ENSG00000183837 CGP 9606 X:152988824-153060467
GeneTranscriptPositionBiotype
ENSG00000183837 (PNMA3)
paraneoplastic Ma antigen 3 		ENST00000424805 (PNMA3-002) 153056482-153060462 nonsense_mediated_decay
ENST00000593810 (PNMA3-003) 153057036-153058467 protein_coding
ENST00000619635 (PNMA3-001) 153056409-153060467 protein_coding
ENSG00000198883 (PNMA5)
paraneoplastic Ma antigen family member 5 		ENST00000361887 (PNMA5-001) 152988824-152992214 protein_coding
ENST00000437210 (PNMA5-002) 152991179-152992786 protein_coding
ENST00000439251 (PNMA5-201) 152988825-152992217 protein_coding
ENST00000452693 (PNMA5-202) 152988825-152992217 protein_coding
ENST00000535214 (PNMA5-203) 152988825-152994127 protein_coding
ENSG00000229979 (U82670.9)
 ENST00000421099 (U82670.9-001) 153052150-153052413 processed_pseudogene
ENSG00000234200 (U82671.8)
 ENST00000452967 (U82671.8-001) 153028785-153030446 unprocessed_pseudogene
CIL_000111_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050424-ENSMUSG00000046287 CGP 10090 X:73033981-73068191
GeneTranscriptPositionBiotype
ENSMUSG00000046287 (Pnma3)
paraneoplastic antigen MA3 		ENSMUST00000060418 (Pnma3-001) 73064787-73068191 protein_coding
ENSMUSG00000050424 (Pnma5)
paraneoplastic antigen family 5 		ENSMUST00000051569 (Pnma5-001) 73034319-73037103 protein_coding
ENSMUST00000114540 (Pnma5-201) 73033981-73037103 protein_coding
ENSMUST00000152209 (Pnma5-002) 73033988-73036103 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000111_0001ENSG00000183837ENST00000424805ENST00000593810ENST00000619635ENSG00000198883ENST00000361887ENST00000437210ENST00000439251ENST00000452693ENST00000535214ENSG00000229979ENST00000421099ENSG00000234200ENST00000452967CIL_000111_0002ENSMUSG00000046287ENSMUST00000060418ENSMUSG00000050424ENSMUST00000051569ENSMUST00000114540ENSMUST00000152209
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000111_0001ENSG00000183837ENST00000424805ENST00000593810ENST00000619635ENSG00000198883ENST00000361887ENST00000437210ENST00000439251ENST00000452693ENST00000535214ENSG00000229979ENST00000421099ENSG00000234200ENST00000452967CIL_000111_0002ENSMUSG00000046287ENSMUST00000060418ENSMUSG00000050424ENSMUST00000051569ENSMUST00000114540ENSMUST00000152209
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183837 ENST00000424805 0.020±0.00 N/A 0.074±0.00 5.794±2.99 0.064±0.00 N/A 0.093±0.02 N/A N/A 0.028±0.00 N/A 0.335±0.21 0.066±0.02 1.205±0.00
ENST00000593810 N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A 0.198±0.00 0.122±0.00 N/A 0.539±0.28 0.042±0.01 4.052±0.00
ENST00000619635 N/A 0.421±0.00 N/A N/A 0.142±0.00 N/A 0.282±0.00 0.066±0.00 0.018±0.00 0.155±0.00 N/A 0.254±0.21 0.077±0.00 0.662±0.00
ENSG00000198883 ENST00000361887 N/A N/A 0.015±0.00 0.344±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.744±0.00
ENST00000439251 N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452693 N/A 0.045±0.00 0.016±0.00 0.746±0.38 0.031±0.02 N/A N/A N/A N/A 0.047±0.03 N/A 0.010±0.00 N/A N/A
ENST00000535214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.240±0.00 5.748±3.92
ENSG00000229979 ENST00000421099 N/A N/A N/A N/A 0.061±0.00 0.113±0.00 N/A N/A 0.169±0.00 N/A 0.056±0.00 N/A N/A 0.133±0.03
ENSG00000234200 ENST00000452967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A 0.056±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046287 ENSMUST00000060418 0.039±0.02 0.079±0.02 0.030±0.01 3.619±0.42 0.026±0.00 0.042±0.01 0.018±0.00 N/A 0.007±0.00 N/A 0.012±0.00 0.023±0.01 0.011±0.00 0.050±0.01
ENSMUSG00000050424 ENSMUST00000051569 0.037±0.00 0.065±0.01 N/A 0.021±0.00 N/A N/A N/A N/A 0.011±0.00 N/A N/A 0.082±0.00 0.936±1.06 0.182±0.12
ENSMUST00000114540 0.035±0.02 0.120±0.07 0.023±0.00 N/A 0.131±0.07 N/A N/A 0.032±0.00 0.030±0.01 0.081±0.04 0.021±0.00 0.171±0.09 1.423±0.96 0.472±0.03
ENSMUST00000152209 N/A 0.180±0.06 0.012±0.00 0.105±0.09 0.110±0.01 N/A N/A 0.047±0.02 N/A 0.015±0.00 N/A 0.180±0.08 1.320±1.09 0.439±0.15

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