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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA A730017C20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050875 A730017C20Rik 10090 + 18:59062248-59076962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058633 A730017C20Rik-001 59062462-59076962 protein_coding
  ENSMUST00000117064 A730017C20Rik-002 59062248-59076962 nonsense_mediated_decay
  ENSMUST00000118510 A730017C20Rik-004 59062494-59075824 protein_coding
  ENSMUST00000154125 A730017C20Rik-003 59062510-59074664 retained_intron
  ENSMUST00000165666 A730017C20Rik-005 59062282-59076962 protein_coding
  ENSMUST00000175830 A730017C20Rik-007 59062511-59075931 protein_coding
  ENSMUST00000175897 A730017C20Rik-006 59062466-59075621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000058633ENSMUST00000117064ENSMUST00000118510ENSMUST00000154125ENSMUST00000165666ENSMUST00000175830ENSMUST00000175897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000058633 0.424±0.43 0.912±0.36 0.155±0.05 26.970±12.44 0.059±0.02 0.403±0.18 0.051±0.02 0.151±0.06 0.085±0.09 0.179±0.06 2.504±0.99 0.077±0.02 1.066±0.69
ENSMUST00000117064 N/A N/A N/A 5.770±0.00 N/A N/A N/A 0.093±0.01 N/A 0.186±0.00 N/A 0.013±0.00 N/A
ENSMUST00000118510 N/A N/A N/A N/A N/A 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154125 0.011±0.00 0.099±0.02 N/A 4.024±0.00 0.041±0.02 0.079±0.00 0.075±0.00 0.013±0.00 0.005±0.00 0.046±0.01 0.336±0.03 0.009±0.00 N/A
ENSMUST00000165666 N/A 1.056±0.20 0.065±0.00 N/A 0.037±0.00 N/A 0.126±0.00 0.087±0.02 0.023±0.00 N/A 1.940±0.68 N/A 0.968±0.48
ENSMUST00000175830 N/A N/A N/A 12.558±0.00 N/A 0.204±0.06 0.299±0.00 0.106±0.00 0.038±0.00 N/A 1.167±0.00 0.075±0.01 N/A
ENSMUST00000175897 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041U CIL_00041U_0002 CGP 18:58836764-59076962
CIL_0006CU CIL_0006CU_0003 CGP 18:59062248-59410446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078922 protein_coding Danio_rerio
ENSG00000186367 KIAA1024L KIAA1024-like protein_coding Homo_sapiens

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