C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal V1 subunit C2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020566 Atp6v1c2 10090 - 12:17284721-17329359 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020884 Atp6v1c2-002 17284722-17324703 protein_coding
  ENSMUST00000095820 Atp6v1c2-001 17284721-17324712 protein_coding
  ENSMUST00000127185 Atp6v1c2-007 17308301-17324730 protein_coding
  ENSMUST00000140751 Atp6v1c2-004 17284722-17324665 nonsense_mediated_decay
  ENSMUST00000143131 Atp6v1c2-005 17308345-17329359 protein_coding
  ENSMUST00000153090 Atp6v1c2-006 17297796-17329348 protein_coding
  ENSMUST00000156727 Atp6v1c2-003 17284723-17308413 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungENSMUST00000020884ENSMUST00000095820ENSMUST00000140751
Transcript ID Kidney Lung
ENSMUST00000020884 N/A 16.559±0.00
ENSMUST00000095820 9.657±0.00 24.324±0.00
ENSMUST00000140751 9.813±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G4 CIL_0001G4_0002 CGP 12:17284721-17430094

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005765 IEA lysosomal membrane
GO:0008553 IDA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0030177 IEA positive regulation of Wnt signaling pathway
GO:0033180 IEA proton-transporting V-type ATPase, V1 domain
GO:0046983 IEA protein dimerization activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070440 ATP6V1C2 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 protein_coding Danio_rerio
ENSG00000143882 ATP6V1C2 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 protein_coding Homo_sapiens

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