C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 6 beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015461 Atf6b 10090 + 17:34647146-34655074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015605 Atf6b-001 34647146-34655074 protein_coding
  ENSMUST00000173984 Atf6b-002 34647211-34654879 protein_coding
  ENSMUST00000174156 Atf6b-005 34651627-34652103 retained_intron
  ENSMUST00000174519 Atf6b-003 34647201-34649202 nonsense_mediated_decay
  ENSMUST00000174614 Atf6b-004 34647201-34649147 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015605ENSMUST00000173984
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015605 24.337±5.89 24.952±7.22 19.961±2.33 30.818±16.29 25.668±13.46 35.074±4.54 7.764±0.91 18.180±4.71 12.548±2.65 30.203±2.74 3.467±1.27 26.352±10.22 15.831±6.95 9.353±4.04
ENSMUST00000173984 6.013±0.00 8.839±2.82 N/A N/A N/A N/A N/A 2.609±0.00 N/A N/A 0.669±0.20 7.747±1.31 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000794 ISS condensed nuclear chromosome
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005769 ISS early endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005815 ISS microtubule organizing center
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006986 IEA response to unfolded protein
GO:0007076 ISS mitotic chromosome condensation
GO:0012505 ISS endomembrane system
GO:0016021 IEA integral component of membrane
GO:0016363 ISS nuclear matrix
GO:0016458 ISS gene silencing
GO:0043565 IEA sequence-specific DNA binding
GO:0045014 ISS negative regulation of transcription by glucose
GO:0045892 ISS negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069883 ATF6B activating transcription factor 6 beta protein_coding Danio_rerio
ENSG00000213676 ATF6B activating transcription factor 6 beta protein_coding Homo_sapiens

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