Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	CCR4-NOT transcription complex, subunit 3
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000277600	CNOT3	9606	+	CHR_HSCHR19_4_CTG3_1:54138190-54156165	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000612029		CNOT3-002	54138249-54156164	retained_intron
	ENST00000612729		CNOT3-009	54144212-54149178	protein_coding
	ENST00000613028		CNOT3-011	54154207-54156165	protein_coding
	ENST00000613470		CNOT3-010	54150211-54154302	processed_transcript
	ENST00000614542		CNOT3-005	54144219-54156165	nonsense_mediated_decay
	ENST00000615532		CNOT3-006	54150041-54154938	protein_coding
	ENST00000617982		CNOT3-001	54138190-54156165	protein_coding
	ENST00000620970		CNOT3-003	54141858-54156164	protein_coding
	ENST00000622193		CNOT3-223	54144487-54156164	protein_coding
	ENST00000622342		CNOT3-007	54153486-54156165	retained_intron

Expression Patterns

No expression data.

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000288	TAS	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289	TAS	nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932	ISS	cytoplasmic mRNA processing body
GO:0005515	IPI	protein binding
GO:0005634	IEA	nucleus
GO:0005829	TAS	cytosol
GO:0006351	IEA	transcription, DNA-templated
GO:0006355	IEA	regulation of transcription, DNA-templated
GO:0006417	IEA	regulation of translation
GO:0010467	TAS	gene expression
GO:0016070	TAS	RNA metabolic process
GO:0016071	TAS	mRNA metabolic process
GO:0030014	IDA	CCR4-NOT complex
GO:0031047	IEA	gene silencing by RNA
GO:2000036	IMP	regulation of stem cell maintenance

No Homologs available.
Homologs

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