C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: general transcription factor IIF, polypeptide 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069910 gtf2f2a 7955 + 1:34328054-34339584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000077744 gtf2f2a-002 34328054-34339444 protein_coding
  ENSDART00000102118 gtf2f2a-001 34328059-34339584 protein_coding
  ENSDART00000135528 gtf2f2a-004 34328070-34339360 protein_coding
  ENSDART00000145535 gtf2f2a-003 34328195-34339151 processed_transcript
  ENSDART00000150038 gtf2f2a-005 34333825-34339502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000077744ENSDART00000102118ENSDART00000150038
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000077744 8.190±1.15 3.356±0.51 9.650±0.00 N/A N/A
ENSDART00000102118 6.962±3.64 9.790±2.65 34.264±20.05 0.595±0.00 4.898±0.00
ENSDART00000150038 8.064±1.99 2.848±0.18 N/A 1.316±0.00 2.321±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AR CIL_0007AR_0001 CGP 1:34318086-34339584

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005674 IEA transcription factor TFIIF complex
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0008026 IEA ATP-dependent helicase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000188342 GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa protein_coding Homo_sapiens
ENSMUSG00000067995 Gtf2f2 general transcription factor IIF, polypeptide 2 protein_coding Mus_musculus

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