C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: recombination signal binding protein for immunoglobulin kappa J region b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052091 rbpjb 7955 + 7:62723096-62849573 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000092580 rbpjb-001 62723096-62849573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000092580
Transcript ID Heart Kidney Liver Muscle
ENSDART00000092580 1.034±0.18 0.474±0.11 0.166±0.00 0.476±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000343 CIL_000343_0001 CGP 7:62646745-62849573
CIL_0002TR CIL_0002TR_0001 CGP 7:62723096-62887024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000982 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
GO:0001756 IGI somitogenesis
GO:0002040 IGI sprouting angiogenesis
GO:0003140 IGI determination of left/right asymmetry in lateral mesoderm
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007368 IGI determination of left/right symmetry
GO:0007507 IGI heart development
GO:0022008 IMP neurogenesis
GO:0030325 IGI adrenal gland development
GO:0039021 IGI pronephric glomerulus development
GO:0039022 IGI pronephric duct development
GO:0060840 IGI artery development
GO:0072149 IGI glomerular visceral epithelial cell fate commitment

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000168214 RBPJ recombination signal binding protein for immunoglobulin kappa J region protein_coding Homo_sapiens
ENSMUSG00000039191 Rbpj recombination signal binding protein for immunoglobulin kappa J region protein_coding Mus_musculus

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