C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000006923 cacna1ab 7955 + 11:31693397-31900366 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000008139 cacna1ab-201 31781427-31900366 protein_coding
  ENSDART00000148949 cacna1ab-004 31857231-31897252 protein_coding
  ENSDART00000149273 cacna1ab-003 31847488-31873286 processed_transcript
  ENSDART00000149597 cacna1ab-002 31836197-31857276 protein_coding
  ENSDART00000149943 cacna1ab-005 31890973-31900026 processed_transcript
  ENSDART00000150130 cacna1ab-001 31693397-31900366 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008139ENSDART00000148949ENSDART00000150130
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008139 1.359±0.00 N/A N/A 0.014±0.00 N/A
ENSDART00000148949 N/A 0.113±0.00 N/A 0.018±0.00 N/A
ENSDART00000150130 2.586±0.00 0.121±0.00 0.158±0.00 N/A 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KV CIL_0006KV_0001 CGP 11:31693397-31914898

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001966 IMP thigmotaxis
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0007274 IMP neuromuscular synaptic transmission
GO:0008331 IMP high voltage-gated calcium channel activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IMP regulation of ion transmembrane transport
GO:0036269 IMP swimming behavior
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141837 CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein_coding Homo_sapiens
ENSMUSG00000034656 Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit protein_coding Mus_musculus

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